3IE4

b-glucan binding domain of Drosophila GNBP3 defines a novel family of pattern recognition receptor

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	4.6	293	0.2M zinc acetate dehydrate, 18% PEG 8000, 0.1M sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K

Crystal Properties
Matthews coefficient	Solvent content
2.1	41.42

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 135.53	α = 90
b = 30.68	β = 107.57
c = 51.65	γ = 90

Symmetry
Space Group	C 1 2 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	ADSC QUANTUM 315		2008-03-25	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ESRF BEAMLINE ID23-1	1.03320	ESRF	ID23-1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.45	46.52	98.8	0.067	12.2	3.6	36216	36216			14.135

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
	1.45	1.52	95.6		0.296	4.1	3.5

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (All)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	SAD	THROUGHOUT	1.45	29.85	34308	34308	1807	99.13	0.1871	0.16686	0.16525	0.19811	RANDOM	11.226

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
		0.02			0.02

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	29.466
r_dihedral_angle_4_deg	17.138
r_dihedral_angle_3_deg	11.212
r_dihedral_angle_1_deg	6.756
r_scangle_it	2.599
r_scbond_it	1.881
r_angle_refined_deg	1.433
r_mcangle_it	1.231
r_mcbond_it	0.862
r_angle_other_deg	0.795
r_mcbond_other	0.238
r_nbd_other	0.21
r_symmetry_vdw_other	0.196
r_nbd_refined	0.193
r_nbtor_refined	0.193
r_xyhbond_nbd_refined	0.18
r_symmetry_hbond_refined	0.18
r_symmetry_vdw_refined	0.125
r_chiral_restr	0.091
r_nbtor_other	0.088
r_symmetry_metal_ion_refined	0.08
r_metal_ion_refined	0.03
r_bond_refined_d	0.012
r_gen_planes_refined	0.006
r_bond_other_d	0.002
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	1612
Nucleic Acid Atoms
Solvent Atoms	192
Heterogen Atoms	14

Software

Software
Software Name	Purpose
DNA	data collection
PHENIX	model building
REFMAC	refinement
XDS	data reduction
SCALA	data scaling
PHENIX	phasing