☰ Navigation Tabs
The crystal structure of the glutaredoxin(grx-1) from Archaeoglobus fulgidus
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 289 0.1M Hepes, 0.2M MgCl2, 25% PEG3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.17 43.26
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.951 α = 90 b = 45.206 β = 90 c = 45.461 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210r mirrows 2009-06-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.9794 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 99.4 99.4 0.064 30.58 9.1 10152 10091 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.744 97.44 0.311 2.13 7 780
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.7 32.06 10152 10091 510 99.4 0.197 0.1949 0.2137 0.23865 0.2661 RANDOM 4.6
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.47 0.13 0.34
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.467 r_dihedral_angle_3_deg 13.8 r_dihedral_angle_1_deg 5.978 r_scangle_it 4.983 r_dihedral_angle_4_deg 4.423 r_scbond_it 2.914 r_angle_refined_deg 1.667 r_mcangle_it 1.573 r_angle_other_deg 0.88 r_mcbond_it 0.789
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.467 r_dihedral_angle_3_deg 13.8 r_dihedral_angle_1_deg 5.978 r_scangle_it 4.983 r_dihedral_angle_4_deg 4.423 r_scbond_it 2.914 r_angle_refined_deg 1.667 r_mcangle_it 1.573 r_angle_other_deg 0.88 r_mcbond_it 0.789 r_mcbond_other 0.173 r_chiral_restr 0.105 r_bond_refined_d 0.021 r_gen_planes_refined 0.009 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 740 Nucleic Acid Atoms Solvent Atoms 81 Heterogen Atoms 2
Software Software Software Name Purpose SBC-Collect data collection HKL-3000 phasing REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling