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CRYSTAL STRUCTURE OF cupin 2 domain-containing protein Hhal_0468 FROM Halorhodospira halophila
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 294 20% PEG3350, PH 7.5, 200MM POTASSIUM SODIUM TARTRATE, 10% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K
Crystal Properties Matthews coefficient Solvent content 1.93 36.34
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.791 α = 90 b = 51.734 β = 90 c = 117.784 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 CCD ADSC QUANTUM 315 MIRRORS 2009-06-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 98.5 0.078 7.1 5.9 20451 -5 27.362
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 98.8 0.45 2.5 4.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 20 19487 650 98.65 0.20019 0.19833 0.1973 0.25767 0.2528 RANDOM 35.282
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.88 -1.59 0.7
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.552 r_dihedral_angle_3_deg 15.491 r_dihedral_angle_4_deg 12.487 r_scangle_it 7.888 r_dihedral_angle_1_deg 6.706 r_scbond_it 5.329 r_mcangle_it 4.182 r_mcbond_it 2.701 r_angle_refined_deg 1.206 r_nbtor_refined 0.293
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.552 r_dihedral_angle_3_deg 15.491 r_dihedral_angle_4_deg 12.487 r_scangle_it 7.888 r_dihedral_angle_1_deg 6.706 r_scbond_it 5.329 r_mcangle_it 4.182 r_mcbond_it 2.701 r_angle_refined_deg 1.206 r_nbtor_refined 0.293 r_symmetry_hbond_refined 0.163 r_nbd_refined 0.156 r_xyhbond_nbd_refined 0.147 r_symmetry_vdw_refined 0.105 r_chiral_restr 0.082 r_metal_ion_refined 0.026 r_bond_refined_d 0.008 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2336 Nucleic Acid Atoms Solvent Atoms 166 Heterogen Atoms 10
Software Software Software Name Purpose SHELX model building REFMAC refinement DENZO data reduction HKL-2000 data scaling SHELX phasing