3HFB

Crystal structure of human tryoptophan hydroxylase type 1 with LP-534193


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8.5293.15pH 8.5 , VAPOR DIFFUSION, HANGING DROP, temperature 293.15 K
Crystal Properties
Matthews coefficientSolvent content
2.3347.11

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 47.354α = 90
b = 58.143β = 96.77
c = 56.625γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayCCDNOIR-1MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 4.2.21.00ALS4.2.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.9232.0221271

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.9221271116095.520.218030.214240.28857RANDOM31.479
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.94-0.42-0.651.49
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.698
r_dihedral_angle_4_deg17.993
r_dihedral_angle_3_deg14.957
r_dihedral_angle_1_deg4.974
r_scangle_it2.496
r_scbond_it1.602
r_angle_refined_deg1.194
r_mcangle_it1.084
r_mcbond_it0.607
r_nbtor_refined0.302
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.698
r_dihedral_angle_4_deg17.993
r_dihedral_angle_3_deg14.957
r_dihedral_angle_1_deg4.974
r_scangle_it2.496
r_scbond_it1.602
r_angle_refined_deg1.194
r_mcangle_it1.084
r_mcbond_it0.607
r_nbtor_refined0.302
r_nbd_refined0.194
r_symmetry_vdw_refined0.163
r_xyhbond_nbd_refined0.127
r_symmetry_hbond_refined0.122
r_chiral_restr0.088
r_bond_refined_d0.009
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2221
Nucleic Acid Atoms
Solvent Atoms294
Heterogen Atoms34

Software

Software
Software NamePurpose
REFMACrefinement