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Rv0301 Rv0300 Toxin Antitoxin Complex from Mycobacterium tuberculosis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 298 200mM Potassium Acetate, 7.5% PEG-3350, 50mM Tris, 500mM NaCl, 140mM Imidazole, 10mM TCEP, beta-mercaptoethanol, pH 7.0, microbatch, under oil, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.77 55.62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 85.557 α = 90 b = 85.557 β = 90 c = 155.611 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2009-03-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-C 0.97920 APS 24-ID-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.49 80 100 0.05 36.9 8.7 94698 94698 -3 26.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.49 1.54 100 0.497 4 8.2 9323
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.49 60.52 94557 4796 99.97 0.157 0.156 0.1531 0.174 0.1702 RANDOM 20.866
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.08 -0.08 0.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.584 r_dihedral_angle_4_deg 18.449 r_dihedral_angle_3_deg 12.237 r_dihedral_angle_1_deg 4.953 r_scangle_it 4.252 r_mcangle_it 2.782 r_scbond_it 2.732 r_mcbond_it 1.766 r_angle_refined_deg 1.486 r_angle_other_deg 0.874
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.584 r_dihedral_angle_4_deg 18.449 r_dihedral_angle_3_deg 12.237 r_dihedral_angle_1_deg 4.953 r_scangle_it 4.252 r_mcangle_it 2.782 r_scbond_it 2.732 r_mcbond_it 1.766 r_angle_refined_deg 1.486 r_angle_other_deg 0.874 r_mcbond_other 0.555 r_chiral_restr 0.091 r_bond_refined_d 0.015 r_gen_planes_refined 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3278 Nucleic Acid Atoms Solvent Atoms 435 Heterogen Atoms 40
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHELX phasing DM phasing REFMAC refinement PDB_EXTRACT data extraction ADSC data collection SHELXD phasing