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Met150Leu/Phe312Cys variant of nitrite reductase from Alcaligenes faecalis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 4.5 298 pH 4.5, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.77 55.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 126.724 α = 90 b = 126.724 β = 90 c = 65.062 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 2004-06-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 1 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 54872 54872
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.5 54872 54872 2914 92.62 0.17912 0.17775 0.20437 0.2238 RANDOM 24.318
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.23 -1.12 -2.23 3.35
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.854 r_dihedral_angle_4_deg 21.445 r_dihedral_angle_3_deg 13.861 r_dihedral_angle_1_deg 10.206 r_scangle_it 3.036 r_scbond_it 2.019 r_angle_refined_deg 1.478 r_mcangle_it 1.236 r_mcbond_it 0.817 r_nbtor_refined 0.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.854 r_dihedral_angle_4_deg 21.445 r_dihedral_angle_3_deg 13.861 r_dihedral_angle_1_deg 10.206 r_scangle_it 3.036 r_scbond_it 2.019 r_angle_refined_deg 1.478 r_mcangle_it 1.236 r_mcbond_it 0.817 r_nbtor_refined 0.31 r_nbd_refined 0.194 r_symmetry_vdw_refined 0.187 r_symmetry_hbond_refined 0.181 r_xyhbond_nbd_refined 0.137 r_chiral_restr 0.106 r_metal_ion_refined 0.078 r_bond_refined_d 0.012 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2565 Nucleic Acid Atoms Solvent Atoms 414 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement