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Crystal structure of flagellar protein FliT from Bordetella bronchiseptica
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 0.2M POTASSIUM THIOCYANATE,30% PEG 2K MME, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 67.751 α = 90 b = 67.751 β = 90 c = 82.289 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r MIRROR 2009-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9793 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 41.4 97.3 0.109 0.109 18.939 9.4 6894 -3 46.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.54 98.2 0.512 0.512 2.9 9.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.5 41.4 6875 326 97.53 0.225 0.222 0.271 0.2726 RANDOM 10.87
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.29 -0.29 0.57
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.443 r_dihedral_angle_4_deg 28.352 r_dihedral_angle_3_deg 21.307 r_dihedral_angle_1_deg 6.068 r_scangle_it 4.138 r_scbond_it 2.726 r_mcangle_it 1.675 r_angle_refined_deg 1.651 r_angle_other_deg 1.029 r_mcbond_it 0.871
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.443 r_dihedral_angle_4_deg 28.352 r_dihedral_angle_3_deg 21.307 r_dihedral_angle_1_deg 6.068 r_scangle_it 4.138 r_scbond_it 2.726 r_mcangle_it 1.675 r_angle_refined_deg 1.651 r_angle_other_deg 1.029 r_mcbond_it 0.871 r_mcbond_other 0.145 r_chiral_restr 0.084 r_bond_refined_d 0.019 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1295 Nucleic Acid Atoms Solvent Atoms 10 Heterogen Atoms 1
Software Software Software Name Purpose HKL-3000 data collection HKL-3000 phasing MLPHARE phasing DM model building SHELXD phasing RESOLVE model building REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling DM phasing RESOLVE phasing