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Crystal Structure of Beta-Lactamse Inhibitory Protein-I (BLIP-I) in Apo Form
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop vapor batch 294 20 mg/ml protein in 50 mM tris, pH 8.0, 50 mM NaCl mixed 1:1 with well solution 30% PEG 4000, 0.3 M lithium chloride, 0.1 M TrisCl, pH 8.5, hanging drop vapor batch, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.77 55.58
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 98.735 α = 90 b = 44.071 β = 104.58 c = 45.291 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate 2000-10-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.1 1.0000 ALS 8.2.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 25 91 0.041 28.336 17522
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.75 1.81 68.7 0.094 11.6 5.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.8 20.49 15645 795 100 0.1874 0.18543 0.1696 0.22695 RANDOM 14.96
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.28 0.23 0.6 -0.21
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.817 r_dihedral_angle_4_deg 15.107 r_dihedral_angle_3_deg 11.105 r_dihedral_angle_1_deg 5.99 r_scangle_it 3.883 r_scbond_it 2.391 r_mcangle_it 1.497 r_angle_refined_deg 1.35 r_mcbond_it 0.852 r_nbtor_refined 0.305
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.817 r_dihedral_angle_4_deg 15.107 r_dihedral_angle_3_deg 11.105 r_dihedral_angle_1_deg 5.99 r_scangle_it 3.883 r_scbond_it 2.391 r_mcangle_it 1.497 r_angle_refined_deg 1.35 r_mcbond_it 0.852 r_nbtor_refined 0.305 r_nbd_refined 0.194 r_symmetry_hbond_refined 0.151 r_xyhbond_nbd_refined 0.148 r_chiral_restr 0.111 r_symmetry_vdw_refined 0.109 r_bond_refined_d 0.013 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1221 Nucleic Acid Atoms Solvent Atoms 201 Heterogen Atoms 11
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction MAR345dtb data collection