3FTT

Crystal Structure of the galactoside O-acetyltransferase from Staphylococcus aureus


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP2930.2M Na diH Phosphate, 20% P3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.3347.13

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 75.761α = 90
b = 75.761β = 90
c = 93.878γ = 120
Symmetry
Space GroupH 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDSBC-3mirrors2008-11-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BM0.9794APS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.595099.40.0930.09330.55.42702027020-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.591.675.40.1950.1954.13.6504

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.6502520325203133099.970.160110.160110.158650.18689RANDOM18.169
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.11-0.06-0.110.17
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.89
r_dihedral_angle_4_deg14.605
r_dihedral_angle_3_deg13.454
r_dihedral_angle_1_deg6.017
r_scangle_it5.39
r_angle_other_deg4.273
r_scbond_it3.343
r_mcangle_it2.011
r_angle_refined_deg1.63
r_mcbond_it1.107
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.89
r_dihedral_angle_4_deg14.605
r_dihedral_angle_3_deg13.454
r_dihedral_angle_1_deg6.017
r_scangle_it5.39
r_angle_other_deg4.273
r_scbond_it3.343
r_mcangle_it2.011
r_angle_refined_deg1.63
r_mcbond_it1.107
r_chiral_restr0.1
r_bond_refined_d0.02
r_gen_planes_other0.011
r_gen_planes_refined0.009
r_bond_other_d
r_mcbond_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1469
Nucleic Acid Atoms
Solvent Atoms218
Heterogen Atoms

Software

Software
Software NamePurpose
HKL-3000data collection
HKL-3000phasing
SHELXDphasing
SHELXEmodel building
RESOLVEmodel building
Cootmodel building
MLPHAREphasing
DMmodel building
ARP/wARPmodel building
CCP4model building
REFMACrefinement
HKL-3000data reduction
HKL-3000data scaling
RESOLVEphasing
DMphasing
CCP4phasing