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S. aureus F98Y DHFR complexed with TMP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.5 25% PEG 3350, 200mM NaCl, 100mM bis-Tris, pH5.5
Crystal Properties Matthews coefficient Solvent content 2.7 54.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.173 α = 90 b = 79.173 β = 90 c = 108.242 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 20 97.7 14138 14138 1 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.13 94.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 20 13136 695 97.99 0.23809 0.23499 0.2372 0.2944 0.2891 RANDOM 17.514
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.11 0.06 0.11 -0.17
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 19.814 r_dihedral_angle_1_deg 9.244 r_angle_other_deg 1.867 r_mcangle_it 1.473 r_scangle_it 1.282 r_angle_refined_deg 1.141 r_mcbond_it 0.868 r_scbond_it 0.793 r_symmetry_hbond_refined 0.722 r_symmetry_hbond_other 0.642
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 19.814 r_dihedral_angle_1_deg 9.244 r_angle_other_deg 1.867 r_mcangle_it 1.473 r_scangle_it 1.282 r_angle_refined_deg 1.141 r_mcbond_it 0.868 r_scbond_it 0.793 r_symmetry_hbond_refined 0.722 r_symmetry_hbond_other 0.642 r_symmetry_vdw_other 0.525 r_symmetry_vdw_refined 0.468 r_xyhbond_nbd_refined 0.343 r_nbd_refined 0.339 r_nbd_other 0.26 r_xyhbond_nbd_other 0.238 r_chiral_restr 0.057 r_bond_refined_d 0.008 r_gen_planes_refined 0.003 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_dihedral_angle_2_deg r_dihedral_angle_4_deg r_nbtor_refined r_nbtor_other r_metal_ion_refined r_metal_ion_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1273 Nucleic Acid Atoms Solvent Atoms 121 Heterogen Atoms 69
Software Software Software Name Purpose DENZO data reduction AMoRE phasing REFMAC refinement SCALEPACK data scaling