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Human START domain of Acyl-coenzyme A thioesterase 11 (ACOT11)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.5 293 0.2M Magnesium chloride, 0.1M Bis-tris, pH5.5, 25% PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 293K 2 VAPOR DIFFUSION, SITTING DROP 5.5 293 0.2M Ammonium formate, 20% PEG3350, pH5.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 52.44 α = 90 b = 130.08 β = 90 c = 165.23 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 mirrors 2008-06-26 M SINGLE WAVELENGTH 2 2 x-ray 100 CCD RAYONIX MX225HE mirrors 2008-06-26 M MAD 1,2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 0.933 ESRF ID14-2 2 SYNCHROTRON BESSY BEAMLINE 14.2 0.97985, 0.97973, 0.97201 BESSY 14.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2 40 0.055 0.055 15.34 6.4 37936 12.7 15.34 14.023
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2 2.1 0.545 0.73 2.57 63.2 5156
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (I) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 36.47 2 36038 36038 1897 100 0.20466 0.20466 0.20222 0.2118 0.25122 0.2595 RANDOM 19.969
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.12 0.02 0.1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.262 r_dihedral_angle_4_deg 17.295 r_dihedral_angle_3_deg 14.186 r_dihedral_angle_1_deg 5.979 r_scangle_it 3.473 r_scbond_it 2.138 r_angle_refined_deg 1.386 r_mcangle_it 1.358 r_angle_other_deg 0.82 r_mcbond_it 0.721
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.262 r_dihedral_angle_4_deg 17.295 r_dihedral_angle_3_deg 14.186 r_dihedral_angle_1_deg 5.979 r_scangle_it 3.473 r_scbond_it 2.138 r_angle_refined_deg 1.386 r_mcangle_it 1.358 r_angle_other_deg 0.82 r_mcbond_it 0.721 r_mcbond_other 0.18 r_chiral_restr 0.082 r_bond_refined_d 0.013 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3810 Nucleic Acid Atoms Solvent Atoms 168 Heterogen Atoms 55
Software Software Software Name Purpose ADSC data collection PHASER phasing REFMAC refinement XDS data reduction XSCALE data scaling