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Crystal Structure of CheY triple mutant F14Q, N59K, E89Y complexed with BeF3- and Mn2+
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.4 298 Tris buffer, Ammonium Sulfate, Glycerol, BeCl2, NaF, MnCl2, pH 8.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 4.13 70.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.491 α = 90 b = 53.543 β = 90 c = 161.568 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray IMAGE PLATE RIGAKU RAXIS IV++ 2006-09-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH3R 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 27.67 97.6 0.058 18.454 4 31409
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 99.5 0.333 3.8 3154
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2 27.67 31360 1593 97.49 0.164 0.162 0.1698 0.206 0.2091 RANDOM 26.553
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.32 0.33 -0.65
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.968 r_dihedral_angle_3_deg 13.383 r_dihedral_angle_4_deg 6.318 r_dihedral_angle_1_deg 5.732 r_scangle_it 3.191 r_scbond_it 2.281 r_angle_refined_deg 1.47 r_mcangle_it 1.168 r_mcbond_it 1.002 r_angle_other_deg 0.979
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.968 r_dihedral_angle_3_deg 13.383 r_dihedral_angle_4_deg 6.318 r_dihedral_angle_1_deg 5.732 r_scangle_it 3.191 r_scbond_it 2.281 r_angle_refined_deg 1.47 r_mcangle_it 1.168 r_mcbond_it 1.002 r_angle_other_deg 0.979 r_symmetry_vdw_other 0.274 r_symmetry_hbond_refined 0.252 r_nbd_refined 0.21 r_nbd_other 0.191 r_mcbond_other 0.18 r_nbtor_refined 0.17 r_xyhbond_nbd_refined 0.163 r_symmetry_vdw_refined 0.129 r_chiral_restr 0.096 r_nbtor_other 0.086 r_metal_ion_refined 0.017 r_bond_refined_d 0.015 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1962 Nucleic Acid Atoms Solvent Atoms 388 Heterogen Atoms 38
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction