☰ Navigation Tabs
Design and biological evaluation of novel, balanced dual PPARa/g agonists
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 293 0.1M Tris, 15-20% PEG3350, 10% Glycerol, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.55 51.73
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.173 α = 90 b = 68.817 β = 90 c = 88.774 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2003-02-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 0.9797 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.01 54 100 0.063 22412
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.01 2.07 100 0.43
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.01 20 21263 1148 99 0.20619 0.20386 0.205 0.24979 0.2484 RANDOM 25.95
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.15 1 -1.15
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 4.651 r_scangle_it 2.116 r_mcangle_it 1.931 r_scbond_it 1.278 r_angle_refined_deg 1.217 r_mcbond_it 1.078 r_nbd_refined 0.19 r_symmetry_vdw_refined 0.153 r_xyhbond_nbd_refined 0.128 r_symmetry_hbond_refined 0.103
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 4.651 r_scangle_it 2.116 r_mcangle_it 1.931 r_scbond_it 1.278 r_angle_refined_deg 1.217 r_mcbond_it 1.078 r_nbd_refined 0.19 r_symmetry_vdw_refined 0.153 r_xyhbond_nbd_refined 0.128 r_symmetry_hbond_refined 0.103 r_chiral_restr 0.083 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2149 Nucleic Acid Atoms Solvent Atoms 259 Heterogen Atoms 29
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling