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Crystal Structure of CheY triple mutant F14E, N59M, E89L complexed with BeF3- and Mn2+
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.4 298 Tris buffer, Ammonium Sulfate, Glycerol, BeCl2, NaF, MnCl2, pH 8.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 4.14 70.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.411 α = 90 b = 53.543 β = 90 c = 161.756 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray IMAGE PLATE RIGAKU RAXIS IV++ 2007-12-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH3R 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 97.3 0.073 28.725 4.6 31381
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 88.7 0.331 4.6 2808
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 50 31340 1593 97.97 0.173 0.171 0.178 0.219 0.2233 RANDOM 26.158
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.26 0.32 -0.58
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.05 r_dihedral_angle_3_deg 13.687 r_dihedral_angle_4_deg 6.569 r_dihedral_angle_1_deg 5.771 r_scangle_it 3.208 r_scbond_it 2.208 r_angle_refined_deg 1.522 r_mcangle_it 1.177 r_mcbond_it 1.025 r_angle_other_deg 1.002
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.05 r_dihedral_angle_3_deg 13.687 r_dihedral_angle_4_deg 6.569 r_dihedral_angle_1_deg 5.771 r_scangle_it 3.208 r_scbond_it 2.208 r_angle_refined_deg 1.522 r_mcangle_it 1.177 r_mcbond_it 1.025 r_angle_other_deg 1.002 r_symmetry_vdw_other 0.289 r_nbd_refined 0.214 r_symmetry_hbond_refined 0.196 r_nbd_other 0.193 r_mcbond_other 0.184 r_nbtor_refined 0.17 r_xyhbond_nbd_refined 0.167 r_symmetry_vdw_refined 0.135 r_chiral_restr 0.1 r_metal_ion_refined 0.09 r_nbtor_other 0.087 r_bond_refined_d 0.015 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1952 Nucleic Acid Atoms Solvent Atoms 371 Heterogen Atoms 44
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction