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Crystal structure of Possible transcriptional regulator for arsenical resistance
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 297 0.2M Mg(OAC), 20%PEG3350, 1/200 papain w/w, VAPOR DIFFUSION, HANGING DROP, temperature 297K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.106 α = 90 b = 42.106 β = 90 c = 104.219 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2008-08-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.97929 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.48 50 99 0.078 83.18 26.4 16477 16305 -3 18.518
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.48 1.49 73.5 0.35 8.57 13.4 294
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.48 39.04 16084 15278 806 98.51 0.16143 0.16143 0.15943 0.19929 0.2202 RANDOM 19.734
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.37 0.37 -0.74
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.4 r_dihedral_angle_4_deg 20.23 r_dihedral_angle_3_deg 13.343 r_sphericity_free 8.162 r_sphericity_bonded 5.67 r_scangle_it 5.029 r_dihedral_angle_1_deg 4.72 r_scbond_it 3.509 r_mcangle_it 2.584 r_rigid_bond_restr 2.034
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.4 r_dihedral_angle_4_deg 20.23 r_dihedral_angle_3_deg 13.343 r_sphericity_free 8.162 r_sphericity_bonded 5.67 r_scangle_it 5.029 r_dihedral_angle_1_deg 4.72 r_scbond_it 3.509 r_mcangle_it 2.584 r_rigid_bond_restr 2.034 r_mcbond_it 1.711 r_angle_refined_deg 1.576 r_chiral_restr 0.109 r_bond_refined_d 0.015 r_gen_planes_refined 0.01 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 762 Nucleic Acid Atoms Solvent Atoms 130 Heterogen Atoms 1
Software Software Software Name Purpose SBC-Collect data collection HKL-3000 phasing MLPHARE phasing DM model building SHELXD phasing RESOLVE model building Coot model building REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling DM phasing RESOLVE phasing