☰ Navigation Tabs
Crystal structure of the N114A mutant of ABL-SH3 domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 288 2M ammonium sulphate, 5% PEG300, 10% glycerol, and 0.1 M of buffer solution, pH 7, vapor diffusion, hanging drop, temperature 288K
Crystal Properties Matthews coefficient Solvent content 2.53 51.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.35 α = 90 b = 51.35 β = 90 c = 46.386 γ = 120
Symmetry Space Group P 32 1 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD BRUKER SMART 6000 Montel Optics 2006-02-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE BRUKER AXS MICROSTAR 1.54
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 44.47 99.9 0.0531 0.0531 8.85 3938 3936 24.173
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.15 2.25 100 0.303 0.303 3.97 4.07 491
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.25 13.61 3411 153 100 0.222 0.22 0.222 0.267 0.2601 RANDOM 20.071
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.077 r_dihedral_angle_4_deg 19.775 r_dihedral_angle_3_deg 16.647 r_dihedral_angle_1_deg 6.26 r_mcangle_it 3.161 r_scangle_it 2.898 r_mcbond_it 2.11 r_angle_refined_deg 2.102 r_scbond_it 2.039 r_nbtor_refined 0.305
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.077 r_dihedral_angle_4_deg 19.775 r_dihedral_angle_3_deg 16.647 r_dihedral_angle_1_deg 6.26 r_mcangle_it 3.161 r_scangle_it 2.898 r_mcbond_it 2.11 r_angle_refined_deg 2.102 r_scbond_it 2.039 r_nbtor_refined 0.305 r_symmetry_hbond_refined 0.279 r_nbd_refined 0.245 r_symmetry_vdw_refined 0.234 r_xyhbond_nbd_refined 0.226 r_chiral_restr 0.13 r_bond_refined_d 0.012 r_gen_planes_refined 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 443 Nucleic Acid Atoms Solvent Atoms 19 Heterogen Atoms 11
Software Software Software Name Purpose SAINT data scaling DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction PROTEUM PLUS data collection SAINT data reduction SCALA data scaling MOLREP phasing