☰ Navigation Tabs
The crystal structure of the thiJ/pfpI family protein from Bacillus anthracis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 289 0.1M Heoes, 0.2M NH4(OAC0), 25% PEG3350, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.28 46.11
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 85.129 α = 90 b = 91.53 β = 90 c = 167.206 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 mirrors 2008-06-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.9794 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 83.62 98.14 0.118 17.5 8.5 55865 54826 2 2 39
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.359 83.29 0.644 1.65 6.3 4303
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.3 83.62 55865 54826 2925 98.14 0.19244 0.19005 0.2052 0.23661 0.2435 RANDOM 38.249
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.72 0.79 -0.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.981 r_dihedral_angle_3_deg 20.976 r_dihedral_angle_4_deg 18.91 r_dihedral_angle_1_deg 7.822 r_scangle_it 3.677 r_scbond_it 2.581 r_angle_refined_deg 2.063 r_mcangle_it 1.598 r_mcbond_it 1.284 r_angle_other_deg 1.209
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.981 r_dihedral_angle_3_deg 20.976 r_dihedral_angle_4_deg 18.91 r_dihedral_angle_1_deg 7.822 r_scangle_it 3.677 r_scbond_it 2.581 r_angle_refined_deg 2.063 r_mcangle_it 1.598 r_mcbond_it 1.284 r_angle_other_deg 1.209 r_nbd_refined 0.239 r_mcbond_other 0.223 r_nbd_other 0.22 r_symmetry_vdw_other 0.214 r_symmetry_vdw_refined 0.212 r_nbtor_refined 0.186 r_xyhbond_nbd_refined 0.184 r_symmetry_hbond_refined 0.159 r_chiral_restr 0.132 r_nbtor_other 0.098 r_bond_refined_d 0.025 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9842 Nucleic Acid Atoms Solvent Atoms 244 Heterogen Atoms 5
Software Software Software Name Purpose SBC-Collect data collection HKL-3000 phasing REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling