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Crystal structure of the mutated S328N hKLC2 TPR domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 7 291 2.0 M ammonium Sulfate, 20% Ethylene Glycol, 0.1 M Bis-Tris propane, pH 7.0, EVAPORATION, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.67 53.92
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 101.202 α = 90 b = 101.202 β = 90 c = 115.63 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH 2 1 x-ray 3 1 x-ray 4 1 x-ray 1,2,3,4 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-D 1.0809 APS 23-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2,3,4 2.7 25 32746
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2,3,4 2.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.7 25 32746 1733 94.96 0.23157 0.22973 0.2595 0.26691 0.2743 RANDOM 1.998
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.22 0.61 1.22 -1.84
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.502 r_dihedral_angle_3_deg 18.543 r_dihedral_angle_4_deg 16.095 r_dihedral_angle_1_deg 4.492 r_angle_refined_deg 0.943 r_symmetry_hbond_refined 0.366 r_nbtor_refined 0.289 r_symmetry_vdw_refined 0.213 r_nbd_refined 0.18 r_xyhbond_nbd_refined 0.129
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.502 r_dihedral_angle_3_deg 18.543 r_dihedral_angle_4_deg 16.095 r_dihedral_angle_1_deg 4.492 r_angle_refined_deg 0.943 r_symmetry_hbond_refined 0.366 r_nbtor_refined 0.289 r_symmetry_vdw_refined 0.213 r_nbd_refined 0.18 r_xyhbond_nbd_refined 0.129 r_chiral_restr 0.063 r_bond_refined_d 0.006 r_gen_planes_refined 0.002 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_scbond_it r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8077 Nucleic Acid Atoms Solvent Atoms 17 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement