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The crystal structure of the RA domain of FLJ10324 (RADIL)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 277 0.4M Ammonium dihydrogen phosphate, 0.1M TRIS pH 8.5, 35 %(v/v) MPD , VAPOR DIFFUSION, SITTING DROP, temperature 277.0K
Crystal Properties Matthews coefficient Solvent content 2.24 45.07
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 46.08 α = 90 b = 46.08 β = 90 c = 135.61 γ = 120
Symmetry Space Group P 31 1 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm Double crystal monochromator with 2 sets of mirrors 2008-05-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.2 1.00849, 0.91841, 0.97968 BESSY 14.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 19.74 99.23 9816
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIRAS THROUGHOUT 2.6 11.63 4715 524 100 0.23149 0.2272 0.23 0.27009 0.2748 RANDOM 32.731
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.22 0.11 0.22 -0.33
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.012 r_dihedral_angle_3_deg 18.243 r_dihedral_angle_4_deg 14.092 r_dihedral_angle_1_deg 6.261 r_scangle_it 1.843 r_angle_refined_deg 1.107 r_scbond_it 1.04 r_mcangle_it 0.842 r_angle_other_deg 0.824 r_mcbond_it 0.446
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.012 r_dihedral_angle_3_deg 18.243 r_dihedral_angle_4_deg 14.092 r_dihedral_angle_1_deg 6.261 r_scangle_it 1.843 r_angle_refined_deg 1.107 r_scbond_it 1.04 r_mcangle_it 0.842 r_angle_other_deg 0.824 r_mcbond_it 0.446 r_chiral_restr 0.068 r_mcbond_other 0.062 r_bond_refined_d 0.009 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1080 Nucleic Acid Atoms Solvent Atoms 9 Heterogen Atoms 9
Software Software Software Name Purpose XDS data scaling autoSHARP phasing REFMAC refinement XDS data reduction XSCALE data scaling