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Crystal structure of SH2 domain of Human Csk (carboxyl-terminal src kinase), Oxidized form.
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1K9A PDB ENTRY 1K9A, sh2 part
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 7.3 298 22% PEG 4000, 100 mM Bis-Tris, pH 7.3., EVAPORATION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.83 32.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 37.114 α = 90 b = 48.025 β = 90 c = 49.866 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 80 IMAGE PLATE MAR scanner 345 mm plate mirrors 2008-03-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X4C NSLS X4C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.37 50 99.8 13.9 22360 2 2 10.284
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.37
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1K9A, sh2 part 1.37 29.36 18349 18298 987 99.72 0.20934 0.20934 0.20893 0.3554 0.21686 RANDOM 11.359
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.06 -0.06
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 819 Nucleic Acid Atoms Solvent Atoms 106 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MAR345dtb data collection HKL-2000 data reduction HKL-2000 data scaling AMoRE phasing