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CRYSTAL STRUCTURE OF A PUTATIVE ANTIBIOTIC BIOSYNTHESIS MONOOXYGENASE (DR_2100) FROM DEINOCOCCUS RADIODURANS AT 1.40 A RESOLUTION
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 277 0.2000M NaOAc, 30.0000% PEG-8000, 0.1M Cacodylate pH 6.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K, VAPOR DIFFUSION, SITTING DROP
Crystal Properties Matthews coefficient Solvent content 1.79 31.47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 33.715 α = 90 b = 59.639 β = 97.18 c = 47.511 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD Flat mirror (vertical focusing) 2008-08-01 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 0.91837,0.97916,0.97849 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 29.814 96.3 0.05 9.2 2.1 35346 13.442
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.4 29.814 35326 1784 96.02 0.13 0.128 0.1389 0.163 0.1706 RANDOM 17.787
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.08 0.3 -0.34 0.34
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.173 r_dihedral_angle_4_deg 25.585 r_dihedral_angle_3_deg 10.554 r_sphericity_free 8.342 r_scangle_it 6.65 r_scbond_it 4.674 r_sphericity_bonded 4.568 r_dihedral_angle_1_deg 3.931 r_mcangle_it 3.421 r_mcbond_it 2.28
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.173 r_dihedral_angle_4_deg 25.585 r_dihedral_angle_3_deg 10.554 r_sphericity_free 8.342 r_scangle_it 6.65 r_scbond_it 4.674 r_sphericity_bonded 4.568 r_dihedral_angle_1_deg 3.931 r_mcangle_it 3.421 r_mcbond_it 2.28 r_rigid_bond_restr 1.974 r_angle_other_deg 1.747 r_angle_refined_deg 1.626 r_mcbond_other 1.177 r_chiral_restr 0.096 r_bond_refined_d 0.017 r_gen_planes_refined 0.009 r_bond_other_d 0.003 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1536 Nucleic Acid Atoms Solvent Atoms 271 Heterogen Atoms 16
Software Software Software Name Purpose REFMAC refinement PHENIX refinement SHELX phasing MolProbity model building SCALA data scaling PDB_EXTRACT data extraction MOSFLM data reduction SHELXD phasing autoSHARP phasing