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The crystal structure of the putative transcriptional regulator from Pseudomonas aeruginosa PAO1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 20% PEG3350, 0.2M MgNitrate, NDSB 256, 0.3M, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.63 53.15
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 160.613 α = 90 b = 53.706 β = 90 c = 57.08 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 mirrors 2007-06-11 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9794, 0.9796 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 80.32 0.96 0.7 35 8.4 24450 23472 2 2 40.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.26 0.767 0.618 1.2 3.3 1880
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.2 80.32 24450 23472 1259 96 0.21674 0.21389 0.26551 0.2744 RANDOM 39.457
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.03 0.65 0.38
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.887 r_dihedral_angle_4_deg 21.808 r_dihedral_angle_3_deg 17.707 r_dihedral_angle_1_deg 7.072 r_scangle_it 3.822 r_scbond_it 2.617 r_angle_refined_deg 1.771 r_mcangle_it 1.745 r_mcbond_it 1.216 r_angle_other_deg 1.132
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.887 r_dihedral_angle_4_deg 21.808 r_dihedral_angle_3_deg 17.707 r_dihedral_angle_1_deg 7.072 r_scangle_it 3.822 r_scbond_it 2.617 r_angle_refined_deg 1.771 r_mcangle_it 1.745 r_mcbond_it 1.216 r_angle_other_deg 1.132 r_symmetry_hbond_refined 0.339 r_symmetry_vdw_other 0.309 r_symmetry_vdw_refined 0.303 r_mcbond_other 0.231 r_nbd_refined 0.23 r_xyhbond_nbd_refined 0.227 r_nbd_other 0.203 r_nbtor_refined 0.18 r_chiral_restr 0.1 r_nbtor_other 0.095 r_bond_refined_d 0.021 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3206 Nucleic Acid Atoms Solvent Atoms 133 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-3000 data reduction HKL-3000 data scaling HKL-3000 phasing