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Putative 5-carboxymethyl-2-hydroxymuconate isomerase from Pseudomonas aeruginosa.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.6 294 0.1 M sodium acetate, 3.5 M sodium formate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.85 56.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 172.796 α = 90 b = 145.243 β = 134.91 c = 122.252 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2008-04-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9792 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 45 99.9 0.11 24.6 7.6 213832 213832 29.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.75 1.78 98.4 0.862 1.96 6.3 10486
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.75 45 213261 213261 10707 99.41 0.137 0.137 0.136 0.1435 0.164 0.1684 RANDOM 22.368
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.58 0.57 -0.39 0.62
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.803 r_dihedral_angle_4_deg 14.074 r_dihedral_angle_3_deg 12.808 r_dihedral_angle_1_deg 5.163 r_scangle_it 4.063 r_scbond_it 2.515 r_mcangle_it 1.595 r_angle_refined_deg 1.586 r_angle_other_deg 1.074 r_mcbond_it 0.938
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.803 r_dihedral_angle_4_deg 14.074 r_dihedral_angle_3_deg 12.808 r_dihedral_angle_1_deg 5.163 r_scangle_it 4.063 r_scbond_it 2.515 r_mcangle_it 1.595 r_angle_refined_deg 1.586 r_angle_other_deg 1.074 r_mcbond_it 0.938 r_mcbond_other 0.306 r_symmetry_vdw_other 0.258 r_nbd_other 0.23 r_nbd_refined 0.229 r_xyhbond_nbd_refined 0.22 r_symmetry_hbond_refined 0.183 r_nbtor_refined 0.173 r_symmetry_vdw_refined 0.152 r_chiral_restr 0.108 r_nbtor_other 0.088 r_bond_refined_d 0.017 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11406 Nucleic Acid Atoms Solvent Atoms 1863 Heterogen Atoms 177
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction SBC-Collect data collection SHELXD phasing MLPHARE phasing DM phasing SOLVE phasing RESOLVE phasing HKL-3000 phasing