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The crystal structure of the protein with unknown function from Archaeoglobus fulgidus
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 289 0.1 M Hepes, pH7.5, 30%PEG MME, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.12 42.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.001 α = 90 b = 63.781 β = 102.3 c = 47.047 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 mirrors 2008-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.9794 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 47.89 96.23 0.059 25.78 4.6 35569 34228 2 2 19
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.6 1.642 86.87 0.331 2.25 3.7 2757
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.6 47.89 35569 34228 1789 96.23 0.16909 0.16678 0.1761 0.21372 0.2211 RANDOM 18.06
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.12 -0.51 -0.18 1.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.017 r_dihedral_angle_4_deg 15.04 r_dihedral_angle_3_deg 13.423 r_dihedral_angle_1_deg 7.321 r_scangle_it 5.055 r_scbond_it 3.767 r_mcangle_it 2.217 r_mcbond_it 1.917 r_angle_refined_deg 1.574 r_angle_other_deg 0.988
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.017 r_dihedral_angle_4_deg 15.04 r_dihedral_angle_3_deg 13.423 r_dihedral_angle_1_deg 7.321 r_scangle_it 5.055 r_scbond_it 3.767 r_mcangle_it 2.217 r_mcbond_it 1.917 r_angle_refined_deg 1.574 r_angle_other_deg 0.988 r_mcbond_other 0.821 r_symmetry_vdw_other 0.273 r_symmetry_vdw_refined 0.244 r_nbd_refined 0.234 r_nbd_other 0.203 r_symmetry_hbond_refined 0.191 r_nbtor_refined 0.179 r_xyhbond_nbd_refined 0.168 r_chiral_restr 0.093 r_nbtor_other 0.08 r_bond_refined_d 0.015 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2092 Nucleic Acid Atoms Solvent Atoms 216 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-3000 data reduction HKL-3000 data scaling HKL-3000 phasing