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Crystal Structure of the complex between Tfb5 and the C-terminal domain of Tfb2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 8.9 277 Tris 20 mM, NaCl 50 mM, pH 8.9, EVAPORATION, temperature 277K
Crystal Properties Matthews coefficient Solvent content 3.06 59.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 99.992 α = 90 b = 99.992 β = 90 c = 37.262 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2007-07-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 0.9198 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 50 98.5 0.06 26 10.3 20032 19737 23
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.87 0.937 0.249 0.249 7.3 8.1 2181
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.8 50 20032 18822 1006 99.1 0.19905 0.19707 0.1957 0.23708 0.2329 RANDOM 27.407
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.12 0.56 1.12 -1.68
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.302 r_dihedral_angle_4_deg 20.909 r_dihedral_angle_3_deg 13.803 r_dihedral_angle_1_deg 5.053 r_scangle_it 3.95 r_scbond_it 2.454 r_mcangle_it 1.66 r_angle_refined_deg 1.27 r_mcbond_it 0.975 r_nbtor_refined 0.303
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.302 r_dihedral_angle_4_deg 20.909 r_dihedral_angle_3_deg 13.803 r_dihedral_angle_1_deg 5.053 r_scangle_it 3.95 r_scbond_it 2.454 r_mcangle_it 1.66 r_angle_refined_deg 1.27 r_mcbond_it 0.975 r_nbtor_refined 0.303 r_symmetry_vdw_refined 0.22 r_nbd_refined 0.204 r_xyhbond_nbd_refined 0.153 r_symmetry_hbond_refined 0.129 r_chiral_restr 0.097 r_bond_refined_d 0.013 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1017 Nucleic Acid Atoms Solvent Atoms 126 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement DNA data collection HKL-2000 data reduction HKL-2000 data scaling SOLVE phasing