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The crystal structure of teicoplanin pseudoaglycone deacetylase Orf2
Crystallization Crystal Properties Matthews coefficient Solvent content 2.23 44.84
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.191 α = 90 b = 64.26 β = 99.16 c = 50.474 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 25 32604
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.6 25 32604 1717 97.74 0.19618 0.19473 0.1946 0.22339 0.2229 RANDOM 26.632
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.12 -0.1 -1.45 -0.7
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.46 r_dihedral_angle_4_deg 17.158 r_dihedral_angle_3_deg 12.699 r_dihedral_angle_1_deg 4.935 r_scangle_it 3.396 r_scbond_it 2.214 r_mcangle_it 1.461 r_angle_refined_deg 1.129 r_mcbond_it 0.827 r_nbtor_refined 0.304
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.46 r_dihedral_angle_4_deg 17.158 r_dihedral_angle_3_deg 12.699 r_dihedral_angle_1_deg 4.935 r_scangle_it 3.396 r_scbond_it 2.214 r_mcangle_it 1.461 r_angle_refined_deg 1.129 r_mcbond_it 0.827 r_nbtor_refined 0.304 r_nbd_refined 0.205 r_symmetry_vdw_refined 0.202 r_xyhbond_nbd_refined 0.141 r_symmetry_hbond_refined 0.129 r_chiral_restr 0.069 r_metal_ion_refined 0.017 r_bond_refined_d 0.009 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2074 Nucleic Acid Atoms Solvent Atoms 241 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement