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cAMP receptor protein from m.tuberculosis, cAMP-free form
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 298 20 mg/mL ptn, 80 mM NaCl, l4% PEG4K, 8% IPA, 0.1M Hepes, pH 7.5, vapor diffusion, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.17 43.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 52.796 α = 90 b = 83.803 β = 90 c = 98.389 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC 2006-11-30 SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-C 1.0 APS 24-ID-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 30 95.2 0.078 13.9 6.2 29026
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 93.7 0.333 6.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 16 27234 1448 95.13 0.21585 0.21215 0.2323 0.28784 0.2978 RANDOM 40.52
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.35 -1.29 1.64
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.369 r_dihedral_angle_4_deg 19.723 r_dihedral_angle_3_deg 17.881 r_dihedral_angle_1_deg 6.05 r_scangle_it 4.3 r_scbond_it 2.779 r_angle_refined_deg 1.667 r_mcangle_it 1.585 r_mcbond_it 1.051 r_nbtor_refined 0.307
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.369 r_dihedral_angle_4_deg 19.723 r_dihedral_angle_3_deg 17.881 r_dihedral_angle_1_deg 6.05 r_scangle_it 4.3 r_scbond_it 2.779 r_angle_refined_deg 1.667 r_mcangle_it 1.585 r_mcbond_it 1.051 r_nbtor_refined 0.307 r_symmetry_vdw_refined 0.218 r_nbd_refined 0.211 r_symmetry_hbond_refined 0.166 r_xyhbond_nbd_refined 0.137 r_chiral_restr 0.126 r_bond_refined_d 0.018 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3431 Nucleic Acid Atoms Solvent Atoms 185 Heterogen Atoms 2
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction HKL-3000 data collection PHENIX phasing