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Crystal structure of the predicted coding region AF_1534 from Archaeoglobus fulgidus
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 3.5 289 0.1M Citric acid, 25% PEG 3350, pH 3.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.09 41.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.734 α = 90 b = 57.614 β = 90 c = 68.687 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD SBC-2 Mirrors 2007-11-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.9794 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 44.15 99.55 0.09 22.17 7.8 8588 8550 2 21
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.949 96.49 0.481 2 4.6 655
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.9 44.15 8550 8550 433 99.55 0.18501 0.18501 0.18304 0.1893 0.22195 0.2192 RANDOM 20.551
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.63 0.4 -1.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.331 r_dihedral_angle_3_deg 13.827 r_dihedral_angle_4_deg 13.622 r_dihedral_angle_1_deg 5.464 r_scangle_it 3.643 r_scbond_it 2.487 r_angle_refined_deg 1.31 r_mcangle_it 1.29 r_mcbond_it 1.193 r_angle_other_deg 0.831
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.331 r_dihedral_angle_3_deg 13.827 r_dihedral_angle_4_deg 13.622 r_dihedral_angle_1_deg 5.464 r_scangle_it 3.643 r_scbond_it 2.487 r_angle_refined_deg 1.31 r_mcangle_it 1.29 r_mcbond_it 1.193 r_angle_other_deg 0.831 r_nbd_refined 0.214 r_symmetry_vdw_other 0.207 r_mcbond_other 0.202 r_nbd_other 0.184 r_nbtor_refined 0.183 r_xyhbond_nbd_refined 0.161 r_symmetry_vdw_refined 0.15 r_symmetry_hbond_refined 0.13 r_nbtor_other 0.085 r_chiral_restr 0.082 r_bond_refined_d 0.014 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 871 Nucleic Acid Atoms Solvent Atoms 89 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement SBC-Collect data collection HKL-3000 data reduction HKL-3000 data scaling HKL-3000 phasing