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B. thetaiotaomicron SusD with maltotriose
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3CKC PDB entry 3CKC
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 seeding in batch 6 298 50mM sodium cacodylate, 75mM calcium acetate, 14% PEG 8000, 70mM maltotriose, pH 6.0, seeding in batch, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.52 51.13
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.69 α = 111.16 b = 67.71 β = 92.94 c = 83.29 γ = 109.06
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 150 CCD BRUKER SMART 6000 mirrors 2007-08-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE OTHER
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 59.5 91.9 0.0785 6.1 3.5 47571 47571
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.44 73.2 0.1765 2.5 2.2 5979
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB entry 3CKC 2.3 59.5 47540 47540 4791 91.8 0.18 0.18 0.18 0.1825 0.216 0.2168 random 7.886
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.928 0.24 -2.109 0.571 0.268 1.357
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 2.538 c_scbond_it 1.978 c_mcangle_it 1.602 c_angle_d 1.161 c_mcbond_it 1.082 c_bond_d 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8075 Nucleic Acid Atoms Solvent Atoms 635 Heterogen Atoms 70
Software Software Software Name Purpose SAINT data scaling AMoRE phasing CNS refinement PDB_EXTRACT data extraction PROTEUM PLUS data collection PROTEUM PLUS data reduction