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Crystal Structure of Di-iron AurF
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 293 18-22% PEG 8000, 50 mM Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.07 40.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 58.143 α = 90 b = 77.188 β = 90 c = 140.405 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2006-08-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.00 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 96.6 0.075 17.5 4.5 42156 39867
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 95 0.423 3.2 4.1 4065
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 25 39867 2129 96.6 0.20302 0.20049 0.2013 0.25082 0.248 RANDOM 42.892
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.9 2.5 -1.59
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.673 r_dihedral_angle_4_deg 19.592 r_dihedral_angle_3_deg 16.483 r_dihedral_angle_1_deg 4.599 r_scangle_it 2.869 r_scbond_it 1.78 r_angle_refined_deg 1.211 r_mcangle_it 1.09 r_mcbond_it 0.686 r_nbtor_refined 0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.673 r_dihedral_angle_4_deg 19.592 r_dihedral_angle_3_deg 16.483 r_dihedral_angle_1_deg 4.599 r_scangle_it 2.869 r_scbond_it 1.78 r_angle_refined_deg 1.211 r_mcangle_it 1.09 r_mcbond_it 0.686 r_nbtor_refined 0.3 r_symmetry_vdw_refined 0.21 r_nbd_refined 0.209 r_xyhbond_nbd_refined 0.162 r_symmetry_hbond_refined 0.138 r_chiral_restr 0.081 r_metal_ion_refined 0.051 r_bond_refined_d 0.012 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4770 Nucleic Acid Atoms Solvent Atoms 280 Heterogen Atoms 6
Software Software Software Name Purpose REFMAC refinement MAR345dtb data collection HKL-2000 data reduction HKL-2000 data scaling SHARP phasing