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Crystal structure of a putative glutathione s-transferase (reut_a1011) from ralstonia eutropha jmp134 at 2.05 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 11 277 NANODROP, 0.2M Lithium sulfate, 0.79M Sodium dihydrogen phosphate, 0.891M Di-potassium hydrogen phosphate, 0.1M CAPS pH 11.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 3.38 63.59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 106.84 α = 90 b = 106.84 β = 90 c = 113.62 γ = 90
Symmetry Space Group P 43 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD Flat mirror (vertical focusing) 2008-01-22 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 0.91837, 0.97879, 0.97935 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.05 29.683 99.5 0.078 14.28 41838 -3 28.954
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.05 2.12 95.8 0.605 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.05 29.683 41801 2110 99.77 0.173 0.171 0.1735 0.207 0.2078 RANDOM 23.519
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.16 0.16 -0.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.544 r_dihedral_angle_4_deg 22.469 r_dihedral_angle_3_deg 13.148 r_scangle_it 6.346 r_dihedral_angle_1_deg 5.663 r_scbond_it 4.69 r_mcangle_it 2.871 r_mcbond_it 1.806 r_angle_refined_deg 1.525 r_angle_other_deg 1.487
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.544 r_dihedral_angle_4_deg 22.469 r_dihedral_angle_3_deg 13.148 r_scangle_it 6.346 r_dihedral_angle_1_deg 5.663 r_scbond_it 4.69 r_mcangle_it 2.871 r_mcbond_it 1.806 r_angle_refined_deg 1.525 r_angle_other_deg 1.487 r_mcbond_other 0.644 r_chiral_restr 0.089 r_bond_refined_d 0.017 r_gen_planes_refined 0.009 r_gen_planes_other 0.003 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3260 Nucleic Acid Atoms Solvent Atoms 364 Heterogen Atoms 29
Software Software Software Name Purpose REFMAC refinement PHENIX refinement SHELX phasing MolProbity model building XSCALE data scaling PDB_EXTRACT data extraction MAR345 data collection XDS data reduction SHELXD phasing autoSHARP phasing