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Crystal complex of SYS-1/POP-1 at 2.5A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 298 100 mM Hepes, 0.6 M Na/K Tartrate, 20 mM Glycine and 5mM DTT, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties Matthews coefficient Solvent content 4.15 70.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 84.969 α = 65.22 b = 85.343 β = 78.08 c = 93.657 γ = 83.02
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 CCD ADSC QUANTUM 315 2006-08-31 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 0.9792 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 50 93.7 75516 75516 2 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.5 2.59 72.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.5 48 75483 3763 93.74 0.218 0.216 0.261 0.2462 RANDOM 44.676
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.74 1.65 0.24 0.89 -0.6 0.86
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.779 r_dihedral_angle_3_deg 17.012 r_dihedral_angle_4_deg 14.897 r_dihedral_angle_1_deg 4.903 r_scangle_it 3.744 r_scbond_it 2.43 r_mcangle_it 1.886 r_mcbond_it 1.159 r_angle_refined_deg 1.155 r_nbtor_refined 0.306
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.779 r_dihedral_angle_3_deg 17.012 r_dihedral_angle_4_deg 14.897 r_dihedral_angle_1_deg 4.903 r_scangle_it 3.744 r_scbond_it 2.43 r_mcangle_it 1.886 r_mcbond_it 1.159 r_angle_refined_deg 1.155 r_nbtor_refined 0.306 r_nbd_refined 0.206 r_symmetry_vdw_refined 0.169 r_symmetry_hbond_refined 0.158 r_xyhbond_nbd_refined 0.138 r_chiral_restr 0.089 r_bond_refined_d 0.009 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9885 Nucleic Acid Atoms Solvent Atoms 72 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing DM phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection