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Crystal structural of native SpaS C-terminal domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 293 (NH4)SO4, MPD, L-Cystein, NaCl, Tris, pH 8.0, vapor diffusion, temperature 293K, pH 8.00
Crystal Properties Matthews coefficient Solvent content 4.29 71.36
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 96.663 α = 90 b = 96.663 β = 90 c = 217.511 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2007-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 83.62 99.6 0.064 11.2 6.6 36776 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.6 2.69 98.3 0.733 4.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.6 83.62 36924 34839 1831 99.4 0.225 0.223 0.2268 0.254 0.2574 RANDOM 20.23
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.7 -0.35 -0.7 1.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.592 r_dihedral_angle_3_deg 22.967 r_dihedral_angle_4_deg 21.173 r_dihedral_angle_1_deg 6.974 r_scangle_it 3.119 r_scbond_it 1.975 r_angle_refined_deg 1.834 r_angle_other_deg 1.189 r_mcangle_it 1.139 r_mcbond_it 0.947
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.592 r_dihedral_angle_3_deg 22.967 r_dihedral_angle_4_deg 21.173 r_dihedral_angle_1_deg 6.974 r_scangle_it 3.119 r_scbond_it 1.975 r_angle_refined_deg 1.834 r_angle_other_deg 1.189 r_mcangle_it 1.139 r_mcbond_it 0.947 r_symmetry_vdw_other 0.303 r_symmetry_hbond_refined 0.242 r_nbd_refined 0.235 r_chiral_restr 0.211 r_nbd_other 0.203 r_symmetry_vdw_refined 0.193 r_nbtor_refined 0.19 r_mcbond_other 0.149 r_xyhbond_nbd_refined 0.148 r_nbtor_other 0.098 r_bond_refined_d 0.018 r_xyhbond_nbd_other 0.012 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3445 Nucleic Acid Atoms Solvent Atoms 36 Heterogen Atoms 61
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data reduction HKL-2000 data scaling PHASER phasing