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Crystal structural of native EscU C-terminal domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 8 293 K2SO4, PEG 3350, pH 8.0, vapor diffusion, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.92 35.87
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.692 α = 90 b = 58.708 β = 90 c = 72.605 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD 2006-11-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 0.97945 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 50 97.8 0.047 16.8 11.8 19563 19133 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.55 95.7 0.538 10.7 1866
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.5 45.64 19563 19002 979 97.8 0.203 0.203 0.202 0.205 0.225 0.231 RANDOM 11.242
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.29 -1.21 -0.08
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.852 r_dihedral_angle_4_deg 15.083 r_dihedral_angle_3_deg 10.842 r_dihedral_angle_1_deg 5.183 r_scangle_it 1.823 r_mcangle_it 1.397 r_angle_refined_deg 1.289 r_scbond_it 1.169 r_mcbond_it 0.852 r_angle_other_deg 0.814
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.852 r_dihedral_angle_4_deg 15.083 r_dihedral_angle_3_deg 10.842 r_dihedral_angle_1_deg 5.183 r_scangle_it 1.823 r_mcangle_it 1.397 r_angle_refined_deg 1.289 r_scbond_it 1.169 r_mcbond_it 0.852 r_angle_other_deg 0.814 r_metal_ion_refined 0.78 r_nbd_refined 0.503 r_symmetry_vdw_other 0.379 r_symmetry_vdw_refined 0.364 r_nbd_other 0.324 r_mcbond_other 0.241 r_nbtor_refined 0.208 r_symmetry_hbond_refined 0.183 r_xyhbond_nbd_refined 0.143 r_nbtor_other 0.142 r_chiral_restr 0.073 r_bond_refined_d 0.011 r_bond_other_d 0.007 r_gen_planes_refined 0.004 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 787 Nucleic Acid Atoms Solvent Atoms 86 Heterogen Atoms 5
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection HKL-2000 data reduction HKL-2000 data scaling PHASER phasing