☰ Navigation Tabs
A complex between a variant of staphylococcal enterotoxin C3 and the variable domain of the murine T cell receptor beta chain 8.2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 298 20% PEG 3350, 0.2 M tri-ammonium citrate pH 7.0, 0.3 % dioxane, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.61 52.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 63.157 α = 74.78 b = 70.638 β = 75.16 c = 98.843 γ = 88.26
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2005-09-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X12B 1.0722 NSLS X12B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 90.1 0.047 96702 92210 2 2 37.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.3 30 67351 67140 3424 95.91 0.234 0.228 0.226 0.278 0.2543 RANDOM 43.566
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.02 -0.64 0.07 0.06 0.38 -2.28
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.302 r_dihedral_angle_4_deg 24.046 r_dihedral_angle_3_deg 18.782 r_dihedral_angle_1_deg 7.198 r_scangle_it 5.368 r_scbond_it 3.972 r_mcangle_it 2.877 r_angle_refined_deg 2.87 r_mcbond_it 1.85 r_nbtor_refined 0.331
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.302 r_dihedral_angle_4_deg 24.046 r_dihedral_angle_3_deg 18.782 r_dihedral_angle_1_deg 7.198 r_scangle_it 5.368 r_scbond_it 3.972 r_mcangle_it 2.877 r_angle_refined_deg 2.87 r_mcbond_it 1.85 r_nbtor_refined 0.331 r_symmetry_vdw_refined 0.33 r_symmetry_hbond_refined 0.31 r_nbd_refined 0.293 r_xyhbond_nbd_refined 0.215 r_chiral_restr 0.174 r_bond_refined_d 0.038 r_gen_planes_refined 0.013
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10908 Nucleic Acid Atoms Solvent Atoms 146 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection HKL-2000 data reduction HKL-2000 data scaling MOLREP phasing