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Mode of Action of a Putative Zinc Transporter CzrB (Zn form)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 277 28 mg/ml protein, 25 mM zinc chloride, 0.1 M Tris-Hcl, pH 7.50, BATCH, temperature 277K
Crystal Properties Matthews coefficient Solvent content 1.93 36.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.75 α = 90 b = 74.56 β = 90 c = 43.94 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2006-11-02 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE F2 1.2827, 1.2818, 1.2567 CHESS F2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 30 98.2 0.072 20.1 7.3 7849 20.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.9 96.4 0.389 4.6 7.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.8 28.43 7397 7397 378 100 0.209 0.207 0.2062 0.25 0.2483 RANDOM 11.05
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.8 0.8
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.66 r_dihedral_angle_4_deg 21.412 r_dihedral_angle_3_deg 14.967 r_dihedral_angle_1_deg 5.432 r_scangle_it 2.145 r_scbond_it 1.296 r_angle_refined_deg 1.109 r_mcangle_it 0.696 r_mcbond_it 0.4 r_nbtor_refined 0.295
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.66 r_dihedral_angle_4_deg 21.412 r_dihedral_angle_3_deg 14.967 r_dihedral_angle_1_deg 5.432 r_scangle_it 2.145 r_scbond_it 1.296 r_angle_refined_deg 1.109 r_mcangle_it 0.696 r_mcbond_it 0.4 r_nbtor_refined 0.295 r_symmetry_vdw_refined 0.202 r_nbd_refined 0.2 r_symmetry_hbond_refined 0.173 r_symmetry_metal_ion_refined 0.173 r_xyhbond_nbd_refined 0.159 r_metal_ion_refined 0.089 r_chiral_restr 0.082 r_bond_refined_d 0.008 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 714 Nucleic Acid Atoms Solvent Atoms 97 Heterogen Atoms 4
Software Software Software Name Purpose REFMAC refinement DPS data reduction MOSFLM data reduction SCALA data scaling SOLVE phasing