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Crystal Structure of AM182 Serotonin Complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 25% PEG 2000 MME, 0.1M MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties Matthews coefficient Solvent content 2.73 54.92
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 91.694 α = 90 b = 91.694 β = 90 c = 37.836 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2007-07-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-BM 1.0000 APS 22-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 79.31 99.4 0.097 16.6 7.8 30083
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.85 1.92 97 0.462 3.8 6.8 2952
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 79.31 23961 1206 99.69 0.224 0.222 0.2305 0.26 0.2593 RANDOM 43.938
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.34 -0.67 -1.34 2
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.475 r_dihedral_angle_3_deg 14.027 r_dihedral_angle_4_deg 13.722 r_scangle_it 8.749 r_scbond_it 6.911 r_dihedral_angle_1_deg 5.595 r_mcangle_it 4.691 r_mcbond_it 3.378 r_angle_refined_deg 1.214 r_chiral_restr 0.373
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.475 r_dihedral_angle_3_deg 14.027 r_dihedral_angle_4_deg 13.722 r_scangle_it 8.749 r_scbond_it 6.911 r_dihedral_angle_1_deg 5.595 r_mcangle_it 4.691 r_mcbond_it 3.378 r_angle_refined_deg 1.214 r_chiral_restr 0.373 r_symmetry_vdw_refined 0.326 r_nbtor_refined 0.323 r_nbd_refined 0.255 r_symmetry_hbond_refined 0.227 r_xyhbond_nbd_refined 0.21 r_gen_planes_refined 0.016 r_bond_refined_d 0.013
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2285 Nucleic Acid Atoms Solvent Atoms 79 Heterogen Atoms 26
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction MX-based data collection