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CRYSTAL STRUCTURE OF A PUTATIVE MULTIPLE ANTIBIOTIC-RESISTANCE REPRESSOR (SSU05_1136) FROM STREPTOCOCCUS SUIS 89/1591 AT 2.20 A RESOLUTION
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.2 277 NANODROP, 0.2M NaCl, 20.0% PEG 8000, 0.1M Phosphate Citrate pH 4.2, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.47 50.18
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.734 α = 90 b = 100.43 β = 111.42 c = 68.695 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2007-08-30 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 1.0000, 0.9798 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 15.895 95.6 0.066 0.066 7.9 1.9 31068 37.26
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.32 97.1 0.417 0.417 1.7 1.9 4574
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.2 15.895 31066 1581 95.45 0.225 0.223 0.2294 0.275 0.2833 RANDOM 39.499
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.51 0.16 -0.35 -0.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.684 r_dihedral_angle_3_deg 10.745 r_dihedral_angle_4_deg 10.545 r_scangle_it 4.372 r_dihedral_angle_1_deg 3.131 r_scbond_it 3.07 r_angle_refined_deg 1.411 r_mcangle_it 1.288 r_angle_other_deg 1.275 r_mcbond_it 0.977
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.684 r_dihedral_angle_3_deg 10.745 r_dihedral_angle_4_deg 10.545 r_scangle_it 4.372 r_dihedral_angle_1_deg 3.131 r_scbond_it 3.07 r_angle_refined_deg 1.411 r_mcangle_it 1.288 r_angle_other_deg 1.275 r_mcbond_it 0.977 r_mcbond_other 0.199 r_nbd_refined 0.15 r_nbtor_refined 0.133 r_symmetry_vdw_other 0.13 r_nbd_other 0.111 r_xyhbond_nbd_refined 0.084 r_chiral_restr 0.081 r_nbtor_other 0.071 r_symmetry_hbond_refined 0.057 r_symmetry_vdw_refined 0.055 r_bond_refined_d 0.012 r_gen_planes_refined 0.003 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4333 Nucleic Acid Atoms Solvent Atoms 224 Heterogen Atoms 34
Software Software Software Name Purpose REFMAC refinement PHENIX refinement SHELX phasing MolProbity model building SCALA data scaling PDB_EXTRACT data extraction ADSC data collection MOSFLM data reduction SHELXD phasing SHARP phasing