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CRYSTAL STRUCTURE OF A PUTATIVE THIOESTERASE II (TFU_2367) FROM THERMOBIFIDA FUSCA YX AT 2.45 A RESOLUTION
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 NANODROP, 22.2% PEG 3350, 0.171M Sodium sulfate, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.36 47.85
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 99.818 α = 90 b = 103.654 β = 90 c = 54.734 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2007-09-15 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.1 1.0000, 0.9796, 0.9794 ALS 8.2.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 48.393 73.1 0.067 11.7 3.4 22595 24.52
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.15 2.23 26.2 0.241 3.2 793
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.16 48.393 22593 1140 72.66 0.184 0.181 0.1865 0.243 0.2468 RANDOM 44.805
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 9.27 -6.8 -2.47
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.766 r_dihedral_angle_4_deg 15.959 r_dihedral_angle_3_deg 12.705 r_scangle_it 5.426 r_dihedral_angle_1_deg 4.606 r_scbond_it 3.983 r_mcangle_it 2.349 r_mcbond_it 1.508 r_angle_refined_deg 1.408 r_angle_other_deg 0.892
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.766 r_dihedral_angle_4_deg 15.959 r_dihedral_angle_3_deg 12.705 r_scangle_it 5.426 r_dihedral_angle_1_deg 4.606 r_scbond_it 3.983 r_mcangle_it 2.349 r_mcbond_it 1.508 r_angle_refined_deg 1.408 r_angle_other_deg 0.892 r_symmetry_vdw_other 0.251 r_mcbond_other 0.241 r_symmetry_hbond_refined 0.207 r_nbd_other 0.204 r_nbd_refined 0.197 r_nbtor_refined 0.175 r_xyhbond_nbd_refined 0.127 r_symmetry_vdw_refined 0.125 r_nbtor_other 0.087 r_chiral_restr 0.081 r_bond_refined_d 0.012 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4066 Nucleic Acid Atoms Solvent Atoms 164 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement PHENIX refinement SHELX phasing MolProbity model building SCALEPACK data scaling PDB_EXTRACT data extraction ADSC data collection HKL-2000 data reduction SHELXD phasing autoSHARP phasing