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Structure of WzzE- Bacterial Polysaccharide Co-polymerase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 298 PEG 3350, pH 7.0, vapor diffusion, temperature 298K, pH 7.00
Crystal Properties Matthews coefficient Solvent content 2.82 56.36
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 107.438 α = 90 b = 108.299 β = 102.15 c = 122.569 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 50 96.8 0.083 9.3 3.4 117899
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.38 78.8 0.297 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.4 47.89 101074 5290 99.06 0.22546 0.22333 0.2346 0.26562 0.2757 RANDOM 54.193
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.09 -0.16 0.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.631 r_dihedral_angle_3_deg 19.111 r_dihedral_angle_4_deg 17.462 r_dihedral_angle_1_deg 5.735 r_scangle_it 4.459 r_scbond_it 2.93 r_mcangle_it 2.765 r_mcbond_it 1.849 r_angle_refined_deg 1.365 r_nbtor_refined 0.295
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.631 r_dihedral_angle_3_deg 19.111 r_dihedral_angle_4_deg 17.462 r_dihedral_angle_1_deg 5.735 r_scangle_it 4.459 r_scbond_it 2.93 r_mcangle_it 2.765 r_mcbond_it 1.849 r_angle_refined_deg 1.365 r_nbtor_refined 0.295 r_symmetry_hbond_refined 0.264 r_symmetry_vdw_refined 0.239 r_nbd_refined 0.202 r_xyhbond_nbd_refined 0.162 r_chiral_restr 0.093 r_bond_refined_d 0.017 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 14376 Nucleic Acid Atoms Solvent Atoms 395 Heterogen Atoms
Software Software Software Name Purpose SCALEPACK data scaling SHARP phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction DENZO data reduction