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Structure of FepE- Bacterial Polysaccharide Co-polymerase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 298 Sodium Citrate Na3C6H5O7, pH 7.5, vapor diffusion, temperature 298K, pH 7.50
Crystal Properties Matthews coefficient Solvent content 4.09 73.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 139.726 α = 90 b = 139.726 β = 90 c = 276.654 γ = 120
Symmetry Space Group P 63 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 50 99.1 0.087 10.3 11.8 44193
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.7 2.8 92.2 0.448 6.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.7 46.13 39284 2072 92.89 0.22803 0.22577 0.2184 0.26947 0.2566 RANDOM 46.932
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.07 0.03 0.07 -0.1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.268 r_dihedral_angle_4_deg 21.694 r_dihedral_angle_3_deg 19.034 r_dihedral_angle_1_deg 5.75 r_scangle_it 5.556 r_mcangle_it 3.736 r_scbond_it 3.351 r_mcbond_it 2.167 r_angle_refined_deg 1.367 r_nbtor_refined 0.329
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.268 r_dihedral_angle_4_deg 21.694 r_dihedral_angle_3_deg 19.034 r_dihedral_angle_1_deg 5.75 r_scangle_it 5.556 r_mcangle_it 3.736 r_scbond_it 3.351 r_mcbond_it 2.167 r_angle_refined_deg 1.367 r_nbtor_refined 0.329 r_nbd_refined 0.225 r_symmetry_vdw_refined 0.194 r_xyhbond_nbd_refined 0.171 r_symmetry_hbond_refined 0.155 r_chiral_restr 0.089 r_bond_refined_d 0.013 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6133 Nucleic Acid Atoms Solvent Atoms 28 Heterogen Atoms
Software Software Software Name Purpose SCALEPACK data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction DENZO data reduction