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Crystal structure of the cytoplasmic domain of FlhB from Aquifex aeolicus
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.5 293 0.2M sodium thiocyanate, 20% PEG 3350, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 114.6 α = 90 b = 33.75 β = 107.78 c = 122.37 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX225HE 2011-02-16 M SINGLE WAVELENGTH 2 2 x-ray 100 CCD RAYONIX MX225HE 2011-02-16 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL44XU 0.9 SPring-8 BL44XU 2 SYNCHROTRON SPRING-8 BEAMLINE BL44XU 0.9791, 0.97936, 0.99508, 0.96413 SPring-8 BL44XU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.55 47.76 14910 14910
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.55 2.69 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.55 29.75 14135 757 99.15 0.24228 0.24122 0.2374 0.26195 0.2574 RANDOM 74.506
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.08 -0.11 0.78 -0.77
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.4 r_dihedral_angle_3_deg 21.735 r_dihedral_angle_4_deg 15.714 r_dihedral_angle_1_deg 6.544 r_scangle_it 4.502 r_scbond_it 2.481 r_mcangle_it 1.957 r_angle_refined_deg 1.844 r_mcbond_it 1.049 r_chiral_restr 0.116
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.4 r_dihedral_angle_3_deg 21.735 r_dihedral_angle_4_deg 15.714 r_dihedral_angle_1_deg 6.544 r_scangle_it 4.502 r_scbond_it 2.481 r_mcangle_it 1.957 r_angle_refined_deg 1.844 r_mcbond_it 1.049 r_chiral_restr 0.116 r_bond_refined_d 0.019 r_gen_planes_refined 0.009
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2707 Nucleic Acid Atoms Solvent Atoms 48 Heterogen Atoms
Software Software Software Name Purpose HKL-2000 data collection SHELXCD phasing SHELXE model building REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling