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Crystal structure of the 2Fe 2S Ferredoxin from Cyanidioschyzon merolae
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICRODIALYSIS MICRODIALYSIS
Crystal Properties Matthews coefficient Solvent content 2.03 39.29
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 36.586 α = 90 b = 54.922 β = 96.32 c = 42.935 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAC Science DIP-2030 2009-10-17 M SINGLE WAVELENGTH 2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL44XU 0.9 SPring-8 BL44XU 2 ROTATING ANODE RIGAKU MICROMAX-002 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.18 36.36 50687
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.18 36.36 50687 2713 96.45 0.17743 0.17643 0.1771 0.19575 0.1948 RANDOM 11.27
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.029 r_dihedral_angle_4_deg 20.373 r_dihedral_angle_3_deg 12.133 r_dihedral_angle_1_deg 6.416 r_scangle_it 5.937 r_scbond_it 3.586 r_angle_refined_deg 2.55 r_mcangle_it 2.455 r_mcbond_it 1.478 r_chiral_restr 0.142
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.029 r_dihedral_angle_4_deg 20.373 r_dihedral_angle_3_deg 12.133 r_dihedral_angle_1_deg 6.416 r_scangle_it 5.937 r_scbond_it 3.586 r_angle_refined_deg 2.55 r_mcangle_it 2.455 r_mcbond_it 1.478 r_chiral_restr 0.142 r_bond_refined_d 0.032 r_gen_planes_refined 0.014
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1472 Nucleic Acid Atoms Solvent Atoms 100 Heterogen Atoms 8
Software Software Software Name Purpose HKL-2000 data collection MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling