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Paired helical filament from Alzheimer's disease brain (AD seed)
Refinement RMS Deviations Key Refinement Restraint Deviation r_long_range_B_other 24.461 r_long_range_B_refined 24.458 r_scangle_other 18.834 r_mcangle_it 12.802 r_mcangle_other 12.796 r_dihedral_angle_3_deg 11.746 r_scbond_other 11.129 r_scbond_it 11.125 r_dihedral_angle_1_deg 9.456 r_mcbond_it 8.25
RMS Deviations Key Refinement Restraint Deviation r_long_range_B_other 24.461 r_long_range_B_refined 24.458 r_scangle_other 18.834 r_mcangle_it 12.802 r_mcangle_other 12.796 r_dihedral_angle_3_deg 11.746 r_scbond_other 11.129 r_scbond_it 11.125 r_dihedral_angle_1_deg 9.456 r_mcbond_it 8.25 r_mcbond_other 8.249 r_dihedral_angle_2_deg 2.417 r_angle_refined_deg 1.545 r_angle_other_deg 0.535 r_chiral_restr 0.078 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_gen_planes_other 0.002 r_bond_other_d r_dihedral_angle_4_deg r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample Paired helical filament from Alzheimer's disease brain (AD seed)
Specimen Preparation Sample Aggregation State TISSUE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method HELICAL Number of Particles 271595 Reported Resolution (Å) 2.8 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type HELICAL Axial Symmetry C1 Axial Rise 2.41 Angular Rotation 179.46
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type TFS FALCON 4i (4k x 4k) Electron Dose (electrons/Å**2) 40
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 1000 Maximum Defocus (nm) 2500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION 5.1 RECONSTRUCTION RELION 5.1
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION