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Crystal structure of hCA II in complex with an 1-Aryl-6,7-dimethoxy-3,4-dihydroisoquinoline-2(1H)-sulfonamide inhibitor
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 1.3 M sodium citrate and 0.1 M Tris-HCl, pH 8.5
Crystal Properties Matthews coefficient Solvent content 2.07 40.66
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.333 α = 90 b = 41.383 β = 104.18 c = 71.942 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2021-12-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ELETTRA BEAMLINE 5.2R 1.0 ELETTRA 5.2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.15 50 95.1 0.086 0.094 0.038 0.999 9.9 5.7 82177
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.15 1.17 89.4 0.672 0.773 0.372 0.678 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.15 41 79780 1970 95.16 0.13285 0.13223 0.1399 0.15897 0.1609 RANDOM 12.927
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.27 -0.1 -0.24 0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.323 r_dihedral_angle_4_deg 23.519 r_dihedral_angle_3_deg 11.8 r_rigid_bond_restr 10.823 r_dihedral_angle_1_deg 6.933 r_scbond_other 6.572 r_scbond_it 6.565 r_scangle_other 6.344 r_long_range_B_refined 4.34 r_long_range_B_other 4.316
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.323 r_dihedral_angle_4_deg 23.519 r_dihedral_angle_3_deg 11.8 r_rigid_bond_restr 10.823 r_dihedral_angle_1_deg 6.933 r_scbond_other 6.572 r_scbond_it 6.565 r_scangle_other 6.344 r_long_range_B_refined 4.34 r_long_range_B_other 4.316 r_mcangle_it 2.575 r_mcangle_other 2.574 r_mcbond_it 2.143 r_mcbond_other 1.982 r_angle_refined_deg 1.866 r_angle_other_deg 1.569 r_chiral_restr 0.116 r_bond_refined_d 0.014 r_gen_planes_refined 0.011 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2072 Nucleic Acid Atoms Solvent Atoms 231 Heterogen Atoms 32
Software Software Software Name Purpose REFMAC refinement SCALEPACK data scaling PDB_EXTRACT data extraction HKL-3000 data reduction REFMAC phasing