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Crystal structure of hCA II in complex with 1-Aryl-6,7-dimethoxy-3,4-dihydroisoquinoline-2(1H)-sulfonamide inhibitor
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 1.3 M sodium citrate and 0.1 M Tris-HCl, pH 8.5
Crystal Properties Matthews coefficient Solvent content 2.07 40.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.239 α = 90 b = 41.479 β = 104.15 c = 71.98 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2021-12-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ELETTRA BEAMLINE 5.2R 1.0 ELETTRA 5.2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.05 50 92.8 0.065 0.071 0.028 0.998 14 6 104567
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.05 1.07 84.1 0.435 0.496 0.235 0.9 4.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.05 35.6 102488 2060 92.76 0.17009 0.16976 0.1794 0.18661 0.1954 RANDOM 11.768
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.29 -0.04 -0.2 -0.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.476 r_dihedral_angle_4_deg 22.825 r_dihedral_angle_3_deg 11.08 r_dihedral_angle_1_deg 7.169 r_long_range_B_refined 2.233 r_long_range_B_other 2.124 r_scangle_other 2.084 r_rigid_bond_restr 2.077 r_angle_refined_deg 1.741 r_scbond_other 1.72
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.476 r_dihedral_angle_4_deg 22.825 r_dihedral_angle_3_deg 11.08 r_dihedral_angle_1_deg 7.169 r_long_range_B_refined 2.233 r_long_range_B_other 2.124 r_scangle_other 2.084 r_rigid_bond_restr 2.077 r_angle_refined_deg 1.741 r_scbond_other 1.72 r_scbond_it 1.719 r_angle_other_deg 1.543 r_mcangle_it 1.445 r_mcangle_other 1.444 r_mcbond_it 1.088 r_mcbond_other 1.078 r_chiral_restr 0.297 r_bond_refined_d 0.011 r_gen_planes_refined 0.011 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2048 Nucleic Acid Atoms Solvent Atoms 232 Heterogen Atoms 35
Software Software Software Name Purpose REFMAC refinement SCALEPACK data scaling PDB_EXTRACT data extraction HKL-3000 data reduction REFMAC phasing