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Structure of bacteriophage HK97 tail assembly chaperone
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.6 298 0.2M NH4(OAc), 0.1M Na HEPES pH 7.6, 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.75 55.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 101.14 α = 90 b = 101.14 β = 90 c = 63.382 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2006-08-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 17-ID APS 17-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 36.8 98.9 0.062 16.8 3.3 13384
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.38 92.9 0.402 2.12 2.8 2549
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.3 36.8 27546 13384 710 98.48 0.23484 0.23198 0.2234 0.29138 0.278 RANDOM 55.004
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.44 -2.44 4.88
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.788 r_dihedral_angle_3_deg 20.123 r_dihedral_angle_4_deg 19.016 r_dihedral_angle_1_deg 6.431 r_scangle_it 3.017 r_scbond_it 2.068 r_angle_refined_deg 1.677 r_mcangle_it 1.434 r_mcbond_it 0.976 r_nbtor_refined 0.299
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.788 r_dihedral_angle_3_deg 20.123 r_dihedral_angle_4_deg 19.016 r_dihedral_angle_1_deg 6.431 r_scangle_it 3.017 r_scbond_it 2.068 r_angle_refined_deg 1.677 r_mcangle_it 1.434 r_mcbond_it 0.976 r_nbtor_refined 0.299 r_nbd_refined 0.224 r_symmetry_vdw_refined 0.174 r_xyhbond_nbd_refined 0.172 r_chiral_restr 0.145 r_symmetry_hbond_refined 0.145 r_bond_refined_d 0.019 r_gen_planes_refined 0.008 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1695 Nucleic Acid Atoms Solvent Atoms 53 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-2000 data collection HKL-2000 data reduction HKL-2000 data scaling SHARP phasing