2LOE
Structure of the Plasmodium 6-cysteine s48/45 Domain
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D HNCACB | 0.4 mM [U-99% 13C; U-99% 15N] Pf1 phage | 95% H2O/5% D2O | 0 | 5.0 | ambient | 308 | |
2 | 2D 1H-15N HSQC | 0.4 mM [U-99% 13C; U-99% 15N] Pf1 phage | 95% H2O/5% D2O | 0 | 5.0 | ambient | 308 | |
3 | 3D CBCA(CO)NH | 0.4 mM [U-99% 13C; U-99% 15N] Pf1 phage | 95% H2O/5% D2O | 0 | 5.0 | ambient | 308 | |
4 | 3D HBHA(CO)NH | 0.4 mM [U-99% 13C; U-99% 15N] Pf1 phage | 95% H2O/5% D2O | 0 | 5.0 | ambient | 308 | |
5 | 3D HCCH-TOCSY | 0.4 mM [U-99% 13C; U-99% 15N] Pf1 phage | 95% H2O/5% D2O | 0 | 5.0 | ambient | 308 | |
6 | 3D 1H-15N NOESY | 0.4 mM [U-99% 13C; U-99% 15N] Pf1 phage | 95% H2O/5% D2O | 0 | 5.0 | ambient | 308 | |
7 | 3D 1H-13C NOESY | 0.4 mM [U-99% 13C; U-99% 15N] Pf1 phage | 95% H2O/5% D2O | 0 | 5.0 | ambient | 308 | |
8 | 2D 1H-13C HSQC | 0.4 mM [U-99% 13C; U-99% 15N] Pf1 phage | 95% H2O/5% D2O | 0 | 5.0 | ambient | 308 | |
9 | 2D 1H-13C HSQC aliphatic | 0.4 mM [U-99% 13C; U-99% 15N] Pf1 phage | 95% H2O/5% D2O | 0 | 5.0 | ambient | 308 | |
10 | 2D 1H-13C HSQC aromatic | 0.4 mM [U-99% 13C; U-99% 15N] Pf1 phage | 95% H2O/5% D2O | 0 | 5.0 | ambient | 308 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | AVANCE | 800 |
3 | Bruker | AVANCE | 900 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | PIPP |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | PIPP | Garrett | |
2 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
3 | structure solution | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
4 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore |