2LB9
Refined solution structure of a cyanobacterial phytochrome gaf domain in the red light-absorbing ground state (corrected pyrrole ring planarity)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 1H-15N NOESY | 1-2 mM [U-13C; U-15N] protein | 93% H2O/7% D2O | 10 | 8.5 | ambient | 298 | |
2 | 3D 1H-13C NOESY | 1-2 mM [U-13C; U-15N] protein | 93% H2O/7% D2O | 10 | 8.5 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
molecular dynamics, torsion angle dynamics | X-PLOR NIH |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | geometry optimization | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
2 | structure solution | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
3 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore |