2K8C
Solution structure of PLAA family ubiquitin binding domain (PFUC) trans isomer in complex with ubiquitin
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.2 mM [U-100% 15N] Ubiquitin, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM NaCl | 6.5 | ambient | 298 | |
2 | 2D 1H-15N HSQC | 0.2 mM [U-100% 15N] PFUC_trans, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50mM NaCl | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITY | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | The structures were calculated with HADDOCK by NMR restraint-guided docking | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | 10 structures for lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read |